PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987316.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YB
Protein Properties Length: 156aa    MW: 17560.8 Da    PI: 4.3936
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB77.81.6e-2411100392
           NF-YB   3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 
                     ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +v+se+++ c +e+++ti+++ +l al  lGf +y+e++ +  +++r+
  XP_022987316.1  11 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRH 100
                     6899***************************************************************************99877776664 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESNE  60
VCSKEEKRTI APEHVLKALE VLGFSEYIEE VYAAYEQHRH ETMQDSLKGG KWSNGAEMTE  120
EEALAEQQRM FAEARARMNG SNTAPKQPEP EQSLES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.21e-93NF-YB family protein