PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987342.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 219aa MW: 24916.5 Da PI: 9.8237

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987342.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.2	1.4e-18	90	144	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++++eql+ Lee F+ + +++ +++ LA++l+L+ rqV vWFqNrRa+ k XP_022987342.1 90 RKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSK 144 788899***********************************************98 PP
2	HD-ZIP_I/II	108.3	5.7e-35	90	178	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rls+eq++lLEe+F+ +++L+ +K +la +L+l+ rqv+vWFqnrRAR k+kq+E+d+e+Lk+ +++lkeen rL+ke +eLr+ XP_022987342.1 90 RKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRS 178 69*************************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MGDQDELCNT RLGLALGFGD YVPKTMQKAN KQPKFLSDLS FSLIPRQESA INMQLQANEP 60 SKDSSFGITR DRSSTNYNCN AISGGLERDR KKLRLSQEQL TLLEETFKLH TTLNLAQKLA 120 LADQLNLKSR QVEVWFQNRR ARSKLKQTEV DCEFLKKYCE RLKEENGRLK KELQELRSRK 180 IGASQLYIQL PKAATLTICP SCDKTTRPVA AVEAHSPPQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	94	RDRKKLR
2	139	147	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47370.1	1e-43	HD-ZIP family protein