PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987421.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 314aa MW: 34881.8 Da PI: 9.7461

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	86.6	6e-27	46	139	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssaseceaesssss 81 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+L + ++sk i+WLl k i++l+ + + +++ XP_022987421.1 46 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLqiptgfspfhqqmffpP---------YDDQHH 131 79*************************************************************66665553333332220.........222222 PP TCP 82 asnsssgk 89 ++++ss++ XP_022987421.1 132 HHHHSSSS 139 22222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MLRNSKEKGF ESKEEGKYRF PKAPTSSSQW SGFRNPRIVR VSRSFGGKDR HSKVCTIRGL 60 RDRRIRLSVP TAIQLYDLQD KLKLGQPSKV IDWLLDVTKL DIDKLPPLQI PTGFSPFHQQ 120 MFFPPYDDQH HHHHHSSSSS SQFCNSLPPP FAVNVKGDSS STAVEKTKIW DMDLALQGKA 180 SSLTKGKWID GSSNQHVEDY NFTPYNSYNS SQFGNNNGVF PSQIEAPTSS SSASALFFTP 240 YASYITNPFE SHIHFLSSNS HALSNPFVPS ALHPFASQNL KPFSAASFNF KQLLHAADGN 300 GADRSNKDGA AGDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	5e-47	TCP family protein