PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987452.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 203aa    MW: 22092.3 Da    PI: 4.5778
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-172070155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+ykGVr++k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +a   +l+g
  XP_022987452.1 20 SRYKGVRRRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAGLFCLRG 70
                    79*****998.**********933...5*********************999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MTKPSSPSTA AAAAVDSPDS RYKGVRRRKW GKWVSEIRLP NSRERIWLGS YDSAEKAARA  60
FDAGLFCLRG RTARFNFPNN PPEIAGASLL SRAEIQSVAA QFANSNPPPP PSSECTQPTI  120
GSPSPSPSPS VVSEATTAVI EERSTFLDLS TAMGSGNYGS EFGLFPEYNP FFNDLMNTTN  180
SGAPFFDYGD ENLDDQDSFL WNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12329KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-53ERF family protein