PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987562.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 390aa MW: 41648.1 Da PI: 9.8746

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987562.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.7	2.9e-40	78	206	2	106
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssas...nsssg.... 88 ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s + + XP_022987562.1 78 PPKRATTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGStilA---Pshlr 169 789******************************************************************999766666666663330...24445 PP TCP 89 ...................kaaksaakskksqksaas 106 ++++++++++ +++++ XP_022987562.1 170 tsyfsptqfavrtrsdlwdRSNNNNNNNNTLVDDSST 206 5566666665544444443333333344444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MLFGFQGEKK KKTRQESTHM IMDGENGIRR PNFPLQLLEK KEEEHPCSTS ANNGTTTTIS 60 TTTTVNPNLQ SSSPKKPPPK RATTKDRHTK VDGRGRRIRM PALCAARVFQ LTRELGHKSD 120 GETIEWLLQQ AEPAVIAATG TGTIPANFTS LNISLRSSGS TILAPSHLRT SYFSPTQFAV 180 RTRSDLWDRS NNNNNNNNTL VDDSSTFLNF NSPNYINAFK HDQGGIDVTD AGKKRRPEHS 240 ESSSENPVGN YLVQSSTGSI PAGHSTPVPA TFWMVTNPSN QASDPMWTFP SVSNSSMFRG 300 GSGGGGGGGF HFMNLPPPMA LLPTGQQVGS GIGGGSGGPA TDTHLGMLAA LSAYRTIPGV 360 SISESPTRGA AGVHQGGNEA HDSTSNRDQS

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MLFGFQGEKK KKTRQESTHM IMDGENGIRR PNFPLQLLEK KEEEHPCSTS ANNGTTTTIS  60
TTTTVNPNLQ SSSPKKPPPK RATTKDRHTK VDGRGRRIRM PALCAARVFQ LTRELGHKSD  120
GETIEWLLQQ AEPAVIAATG TGTIPANFTS LNISLRSSGS TILAPSHLRT SYFSPTQFAV  180
RTRSDLWDRS NNNNNNNNTL VDDSSTFLNF NSPNYINAFK HDQGGIDVTD AGKKRRPEHS  240
ESSSENPVGN YLVQSSTGSI PAGHSTPVPA TFWMVTNPSN QASDPMWTFP SVSNSSMFRG  300
GSGGGGGGGF HFMNLPPPMA LLPTGQQVGS GIGGGSGGPA TDTHLGMLAA LSAYRTIPGV  360
SISESPTRGA AGVHQGGNEA HDSTSNRDQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	2e-49	TCP family protein