PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987666.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 574aa MW: 64066.3 Da PI: 6.8653

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.3e-13	398	443	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N++f+ L++llP+ +K +K ++L+ + eY++sL XP_022987666.1 398 HHVISERRRREKLNDSFQALKSLLPPG-----TKKDKGSVLTTTREYMSSL 443 58899******************97.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MEIAFHLHES HRHSFLQTLM HSFGCTYICL WSYLPQPSKY LISLSLPLLS LLYFLLGFGH 60 FVLMGFGSFL DMTCSCLRFL DGLCVQEIEV QTCSSSAGSL AQLLFEEYRQ LEFSVEDGLV 120 PGLAHKHNDP CLKLEDSQLQ TYASADIQRR FYLAARIQAS IFLGSINGEI ELGFSNVSQV 180 DMQMIINNLL PGDVVGPKIP LELPQPATKL KLIPSSSLSP IPNPNPNQLS SSTSSLRSQS 240 MDSPAECSSL LLNAIQTTPH ITEPFTADIP ILPSQHQHSM DSIFAQARNL QFPTPEALDE 300 AMTRTILAVL SSPAGSSSSS MHKTLEGMIT PTYHLNVKAS AFKKYARVLT PTTARLNQNL 360 STRQSLLKRS LAFMRNLNLM RLRERMPTTS RPTSSQLHHV ISERRRREKL NDSFQALKSL 420 LPPGTKKDKG SVLTTTREYM SSLKAQVAEL SRRNQQLEAQ LLQSAKDEET SVFSQEERFR 480 VGISQVSEST SEGQIIDLHI TTRGESPLTD MVIGVLEFLK PLNNVRVVSM EGNTQLTPSS 540 STNHLTLRLI IEENEWDESA FREAVERVVS DLAR

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MEIAFHLHES HRHSFLQTLM HSFGCTYICL WSYLPQPSKY LISLSLPLLS LLYFLLGFGH  60
FVLMGFGSFL DMTCSCLRFL DGLCVQEIEV QTCSSSAGSL AQLLFEEYRQ LEFSVEDGLV  120
PGLAHKHNDP CLKLEDSQLQ TYASADIQRR FYLAARIQAS IFLGSINGEI ELGFSNVSQV  180
DMQMIINNLL PGDVVGPKIP LELPQPATKL KLIPSSSLSP IPNPNPNQLS SSTSSLRSQS  240
MDSPAECSSL LLNAIQTTPH ITEPFTADIP ILPSQHQHSM DSIFAQARNL QFPTPEALDE  300
AMTRTILAVL SSPAGSSSSS MHKTLEGMIT PTYHLNVKAS AFKKYARVLT PTTARLNQNL  360
STRQSLLKRS LAFMRNLNLM RLRERMPTTS RPTSSQLHHV ISERRRREKL NDSFQALKSL  420
LPPGTKKDKG SVLTTTREYM SSLKAQVAEL SRRNQQLEAQ LLQSAKDEET SVFSQEERFR  480
VGISQVSEST SEGQIIDLHI TTRGESPLTD MVIGVLEFLK PLNNVRVVSM EGNTQLTPSS  540
STNHLTLRLI IEENEWDESA FREAVERVVS DLAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	403	408	ERRRRE
2	404	409	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	3e-52	bHLH family protein