PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987667.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 538aa MW: 60053.3 Da PI: 6.8325

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.5e-13	362	407	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N++f+ L++llP+ +K +K ++L+ + eY++sL XP_022987667.1 362 HHVISERRRREKLNDSFQALKSLLPPG-----TKKDKGSVLTTTREYMSSL 407 58899******************97.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MEIAFHLHES HRHSFLQTLM HSFGCTYICL WSYLPQPSNC LRFLDGLCVQ EIEVQTCSSS 60 AGSLAQLLFE EYRQLEFSVE DGLVPGLAHK HNDPCLKLED SQLQTYASAD IQRRFYLAAR 120 IQASIFLGSI NGEIELGFSN VSQVDMQMII NNLLPGDVVG PKIPLELPQP ATKLKLIPSS 180 SLSPIPNPNP NQLSSSTSSL RSQSMDSPAE CSSLLLNAIQ TTPHITEPFT ADIPILPSQH 240 QHSMDSIFAQ ARNLQFPTPE ALDEAMTRTI LAVLSSPAGS SSSSMHKTLE GMITPTYHLN 300 VKASAFKKYA RVLTPTTARL NQNLSTRQSL LKRSLAFMRN LNLMRLRERM PTTSRPTSSQ 360 LHHVISERRR REKLNDSFQA LKSLLPPGTK KDKGSVLTTT REYMSSLKAQ VAELSRRNQQ 420 LEAQLLQSAK DEETSVFSQE ERFRVGISQV SESTSEGQII DLHITTRGES PLTDMVIGVL 480 EFLKPLNNVR VVSMEGNTQL TPSSSTNHLT LRLIIEENEW DESAFREAVE RVVSDLAR

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MEIAFHLHES HRHSFLQTLM HSFGCTYICL WSYLPQPSNC LRFLDGLCVQ EIEVQTCSSS  60
AGSLAQLLFE EYRQLEFSVE DGLVPGLAHK HNDPCLKLED SQLQTYASAD IQRRFYLAAR  120
IQASIFLGSI NGEIELGFSN VSQVDMQMII NNLLPGDVVG PKIPLELPQP ATKLKLIPSS  180
SLSPIPNPNP NQLSSSTSSL RSQSMDSPAE CSSLLLNAIQ TTPHITEPFT ADIPILPSQH  240
QHSMDSIFAQ ARNLQFPTPE ALDEAMTRTI LAVLSSPAGS SSSSMHKTLE GMITPTYHLN  300
VKASAFKKYA RVLTPTTARL NQNLSTRQSL LKRSLAFMRN LNLMRLRERM PTTSRPTSSQ  360
LHHVISERRR REKLNDSFQA LKSLLPPGTK KDKGSVLTTT REYMSSLKAQ VAELSRRNQQ  420
LEAQLLQSAK DEETSVFSQE ERFRVGISQV SESTSEGQII DLHITTRGES PLTDMVIGVL  480
EFLKPLNNVR VVSMEGNTQL TPSSSTNHLT LRLIIEENEW DESAFREAVE RVVSDLAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	367	372	ERRRRE
2	368	373	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-52	bHLH family protein