PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987812.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 282aa    MW: 30490.7 Da    PI: 10.5624
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.32.5e-19142175134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022987812.1 142 CSECNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 175
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MSHLLTPRPS SPSPLRPILL PSLPSALSSA MAPPYHDDLL RRSSSHHLSS SSSSLSFPAP  60
DHSNSDDPRR LQLKHESESS SCCENHNTHN DLVNWSSSSK IRLLINSNQI NTATQMIDGA  120
RNSHDLNRTT MLNDGAAIIR TCSECNTTKT PLWRSGPRGP KSLCNACGIR QRKARRAMAE  180
AAAVNGGVPC GGKSAAIILK TNKAVQHKIM TKPAAKKLKR KRKDDVVVAA GGGGGGKKGC  240
FEDIKIGRRL SEISSSYQRV FPQDEREAAI LLMTLSYGLL HG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.13e-16GATA family protein