PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987814.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 271aa    MW: 29158.4 Da    PI: 10.9363
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.42.3e-19131164134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022987814.1 131 CSECNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 164
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MSHLLTPRPS SPSPLRPILL PSLPSALSSA MAPPYHDDLL RRSSSHHLFF PTTTATSSSS  60
SSSSSSSLSF PAPDHSNSDD PRRLQLKHEI RLLINSNQIN TATQMIDGAR NSHDLNRTTM  120
LNDGAAIIRT CSECNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAMAEA AAVNGGVPCG  180
GKSAAIILKT NKAVQHKIMT KPAAKKLKRK RKDDVVVAAG GGGGGKKGCF EDIKIGRRLS  240
EISSSYQRVF PQDEREAAIL LMTLSYGLLH G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.12e-16GATA family protein