PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987815.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 258aa    MW: 27856 Da    PI: 10.9363
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987815.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.2e-19118151134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022987815.1 118 CSECNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 151
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MSHLLTPRPS SPSPLRPILL PSLPSALSSA MAPPYHDDLL RRSSSHHLSS SSSSLSFPAP  60
DHSNSDDPRR LQLKHEIRLL INSNQINTAT QMIDGARNSH DLNRTTMLND GAAIIRTCSE  120
CNTTKTPLWR SGPRGPKSLC NACGIRQRKA RRAMAEAAAV NGGVPCGGKS AAIILKTNKA  180
VQHKIMTKPA AKKLKRKRKD DVVVAAGGGG GGKKGCFEDI KIGRRLSEIS SSYQRVFPQD  240
EREAAILLMT LSYGLLHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.12e-16GATA family protein