PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987816.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 256aa    MW: 27477.5 Da    PI: 10.8531
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987816.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.1e-19116149134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022987816.1 116 CSECNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 149
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MSHLLTPRPS SPSPLRPILL PSLPSALSSA MAPPYHDDLL RRSSSHHLFF PTTTATSSSS  60
SSSSSSSLSF PAPDHSNSDD PRRLQLKHEM IDGARNSHDL NRTTMLNDGA AIIRTCSECN  120
TTKTPLWRSG PRGPKSLCNA CGIRQRKARR AMAEAAAVNG GVPCGGKSAA IILKTNKAVQ  180
HKIMTKPAAK KLKRKRKDDV VVAAGGGGGG KKGCFEDIKI GRRLSEISSS YQRVFPQDER  240
EAAILLMTLS YGLLHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.12e-16GATA family protein