PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987987.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 561aa MW: 61891.7 Da PI: 6.15

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987987.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.5	7.3e-29	211	264	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr++W+ eLH++Fv+av+qL G ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl XP_022987987.1 211 RPRVVWSVELHRKFVSAVNQL-GLEKAVPKKILDLMNVEGLTRENVASHLQKYRL 264 59*****************.******************************8 PP
2	Myb_DNA-binding	40.6	5.8e-13	213	263	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ +g+t++++ s++qky+ XP_022987987.1 213 RVVWSVELHRKFVSAVNQLGLEkaVPKKILDLMNvEGLTRENVASHLQKYR 263 678***********************************************7 PP
3	Response_reg	82.9	1e-27	26	134	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ +++l+ +l+k +y +v++++ + eal++l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++ah++ e++ + + G XP_022987987.1 26 VLAVDDDPICLKVLEHLLRKCQY-HVTTTKRSIEALKMLRENRnkVDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMLSAHSDTELVMKGIAHG 118 799******************.***********999889***************87754.558****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_022987987.1 119 ACDYLLKPVRIEELKN 134 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MTVESHSVDS AGDGGAADHF PVGMRVLAVD DDPICLKVLE HLLRKCQYHV TTTKRSIEAL 60 KMLRENRNKV DLVISDVNMP DMDGFKLLEL VGLEMDLPVI MLSAHSDTEL VMKGIAHGAC 120 DYLLKPVRIE ELKNIWQHVI RRKKLEPKAK NKFPNQDNVG NGGSEGERGF SSTSNADNEK 180 LNRKRKEQDD DEDEEGKENE VDIDDPSNLK RPRVVWSVEL HRKFVSAVNQ LGLEKAVPKK 240 ILDLMNVEGL TRENVASHLQ KYRLYLKRIS NVASQQANMA ATFGSKEGTY MRIGSYDGYG 300 DMHGFAGSGR LPSSSLSYYS PVGMSLIQQS SHNLNCAISN LGHPAIMLPP HQTTNLLQGI 360 PTSLELGHLQ HSKSTTSIGE AFDIDFGCSS FLDPDPSNGN WQGAAQLLRF SATLNPIEEY 420 PIDHMHAMNS SISSAPSKNR NISVVGSVSA PLLDSRDLQC QAGVGVVDSM PKQSWEEHEH 480 DYARSPLSQS FNQNSLVCER KVGSSLIVPS NDAQLSFPQH SVVEKLGPNT KTNADRNLHD 540 GSIQGSFESL DDIMNAMIKQ V

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MTVESHSVDS AGDGGAADHF PVGMRVLAVD DDPICLKVLE HLLRKCQYHV TTTKRSIEAL  60
KMLRENRNKV DLVISDVNMP DMDGFKLLEL VGLEMDLPVI MLSAHSDTEL VMKGIAHGAC  120
DYLLKPVRIE ELKNIWQHVI RRKKLEPKAK NKFPNQDNVG NGGSEGERGF SSTSNADNEK  180
LNRKRKEQDD DEDEEGKENE VDIDDPSNLK RPRVVWSVEL HRKFVSAVNQ LGLEKAVPKK  240
ILDLMNVEGL TRENVASHLQ KYRLYLKRIS NVASQQANMA ATFGSKEGTY MRIGSYDGYG  300
DMHGFAGSGR LPSSSLSYYS PVGMSLIQQS SHNLNCAISN LGHPAIMLPP HQTTNLLQGI  360
PTSLELGHLQ HSKSTTSIGE AFDIDFGCSS FLDPDPSNGN WQGAAQLLRF SATLNPIEEY  420
PIDHMHAMNS SISSAPSKNR NISVVGSVSA PLLDSRDLQC QAGVGVVDSM PKQSWEEHEH  480
DYARSPLSQS FNQNSLVCER KVGSSLIVPS NDAQLSFPQH SVVEKLGPNT KTNADRNLHD  540
GSIQGSFESL DDIMNAMIKQ V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-113	ARR-B family protein