PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022988194.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 244aa    MW: 26434.6 Da    PI: 5.0362
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022988194.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA48.62.7e-15174208136
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36 
                     ++p++VNaKQyq+Il+RRq+Rak+e+ekkl +k+rk
  XP_022988194.1 174 QDPVFVNAKQYQGILRRRQARAKAEAEKKL-IKARK 208
                     58****************************.88887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MQSKSETNNQ LQSDPNGAPS TTIYYEPWCS SMGYSPFPLP VVGGNASSST SLEFPNGGSE  60
SNDGQSVSNN DVNDEEDDVS KEVQATGSPH SAGSYRQDAQ KMQHVSSNLP AMHGECLTQS  120
TQLELVGHSI ACASNPYQDP YYGGMMAFYG HQPVGYPMVG APHARMPLPI EIAQDPVFVN  180
AKQYQGILRR RQARAKAEAE KKLIKARKVD FVSFCWTGLF LCVEGGVMLD LFSDKTILIG  240
SLGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.21e-30NF-YA family protein