PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988196.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 256aa MW: 29412.3 Da PI: 9.741

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.4	3.1e-35	25	116	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+ye++ed+++++++sw ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn YgFkk+ ++ weF +++Fkkg+k+ll + XP_022988196.1 25 FLAKTYELVEDAATDHIVSWGRSHTTFVVWRPPEFATHILPNYFKHNNFSSFVRQLNSYGFKKIVAKR---------WEFGNQNFKKGEKQLLLE 110 9*******************99*************************************998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_022988196.1 111 IQRRKP 116 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MEEMIENYSV GFWSAESQKA NPAPFLAKTY ELVEDAATDH IVSWGRSHTT FVVWRPPEFA 60 THILPNYFKH NNFSSFVRQL NSYGFKKIVA KRWEFGNQNF KKGEKQLLLE IQRRKPHNHN 120 NNLHQQQQIP FQFCYTAAAA TSSSSSDPDI LAALTQDNRR LRRRNYMLLS ELTQMKNLYS 180 DIIYFIQNHV KPLDHKYGRS VPKLVDLKPP PPPPPPQTEA GVEEGSGSVQ LFGVPIRGKK 240 RVHHEEGELQ MSSHGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	2e-59	HSF family protein