PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988268.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 316aa MW: 36195.4 Da PI: 8.4222

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.8	4.3e-06	22	42	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg F+ + +Lk+H+++H XP_022988268.1 22 CQECGAEFKKPAYLKQHMQSH 42 *******************99 PP
2	zf-C2H2	15	6.9e-05	48	72	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C s++rk++L+rH+ H XP_022988268.1 48 YICSidGCEASYRRKDHLTRHLLHH 72 899999***************9987 PP
3	zf-C2H2	19.8	2.1e-06	115	139	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk F+ s+L++H +H XP_022988268.1 115 FVCPedGCGKIFRYASQLQKHEHSH 139 89*******************9888 PP
4	zf-C2H2	19.7	2.3e-06	208	231	3	23
ET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirt.H 23 C+ C+k+Fs+ snL++H+++ H XP_022988268.1 208 CTheGCSKVFSTISNLHQHMKVvH 231 88889****************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MESGKHNDEG GDRTKNGKSN ICQECGAEFK KPAYLKQHMQ SHSLERPYIC SIDGCEASYR 60 RKDHLTRHLL HHQGLIIKCP IEGCSREFAY ISCVNRHLKE CHEGGAPPEE SQKQFVCPED 120 GCGKIFRYAS QLQKHEHSHF KLDSIEAYCA EPGCMKTFTN KKCLQAHMQS CHQYINCEIC 180 GEKKLRKNMK QHLRQKHESE GPPGAIPCTH EGCSKVFSTI SNLHQHMKVV HLGQKPFACG 240 FPGCGMRFGY KHVRDNHEKK GQHVYTNGDF EAADEQFRSK PRGGRKRIRP TVEMLIRKRI 300 TPPPSELDFI MMDEEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-122	C2H2 family protein