PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022988525.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 337aa    MW: 38148 Da    PI: 7.9013
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022988525.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32.1e-11154197755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + ErrRRdriN+++  L++l+P++      K + a+ L  +++Y+k+L+
  XP_022988525.1 154 QSERRRRDRINQKLKDLQKLVPNR-----SKTDRASLLDDTIQYLKQLK 197
                     68*********************8.....6*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MNQWIVPKWN QPQQHEDVSR SSHVHFPHKN TTFSHNLVPM AKYEAVERTW ENGDQEAAVD  60
GHGEVLLQMA STKHSWGQSE DTLESIVHSS LLRKRTRSNP EGKDETFMSG AFLESHRSFK  120
AKNSIEDLAP DDGSEDEHNT KRKTSGSCSI RRTQSERRRR DRINQKLKDL QKLVPNRSKT  180
DRASLLDDTI QYLKQLKAQV QFMCSIRSDV PQMIVPLGMQ QQQQQQLQVS LLAARMGLLD  240
TASMASSSSS FPCAAACSPT LLPSIISSTK PKSKLSTAAF VPPTDPFCTF LAQSMDMDLY  300
SKMVTLYCQE VNRTPRQTSR LMESQFVEGI EEDMHQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141160KRKTSGSCSIRRTQSERRRR
2156161ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61270.15e-19bHLH family protein