PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022988606.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 218aa    MW: 24080 Da    PI: 6.6634
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022988606.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.92.4e-3341301128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev..diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppGfrF+Pt+eelv eyLk kv +  l++ ++i+e+   +++++Pwd+p    + e++ y Fsk+++     +r+ r   sgyWka+g++++++
  XP_022988606.1   4 LPPGFRFEPTEEELVFEYLKCKVFSFALPA-SIIPETttSVCNLDPWDIPGGGGGWEEDAYLFSKNQEC----DRRVRWSPSGYWKAKGSERKIV 93 
                     79**************************99.556665468**********6656667789****98775....48899999************** PP

             NAM  94 skkgel...vglkktLvfykgrapkgektdWvmheyrl 128
                     s+++ +   vg++ktLvf+ g++++ +kt Wvmheyrl
  XP_022988606.1  94 SSSSDAvglVGMRKTLVFWMGSSSS-RKTGWVMHEYRL 130
                     *844435559*********998877.8*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MRGLPPGFRF EPTEEELVFE YLKCKVFSFA LPASIIPETT TSVCNLDPWD IPGGGGGWEE  60
DAYLFSKNQE CDRRVRWSPS GYWKAKGSER KIVSSSSDAV GLVGMRKTLV FWMGSSSSRK  120
TGWVMHEYRL LLSPTQAPTP PSVVINNMEK WVVCRIVCNN SGIKNDLHFH PLQYPVSAST  180
NDDTNALSDD SVSSTASSSS FSATTTMPFP NHHSSASN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.14e-36NAC family protein