PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022988607.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 217aa    MW: 24023 Da    PI: 6.6634
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022988607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.63e-3341291128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev..diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppGfrF+Pt+eelv eyLk kv +  l++ ++i+e+   +++++Pwd+p    + e++ y Fsk+++     +r+ r   sgyWka+g++++++
  XP_022988607.1   4 LPPGFRFEPTEEELVFEYLKCKVFSFALPA-SIIPETttSVCNLDPWDIPGG-GGWEEDAYLFSKNQEC----DRRVRWSPSGYWKAKGSERKIV 92 
                     79**************************99.556665468**********43.4456789****98775....48899999************** PP

             NAM  94 skkgel...vglkktLvfykgrapkgektdWvmheyrl 128
                     s+++ +   vg++ktLvf+ g++++ +kt Wvmheyrl
  XP_022988607.1  93 SSSSDAvglVGMRKTLVFWMGSSSS-RKTGWVMHEYRL 129
                     *844435559*********998877.8*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MRGLPPGFRF EPTEEELVFE YLKCKVFSFA LPASIIPETT TSVCNLDPWD IPGGGGWEED  60
AYLFSKNQEC DRRVRWSPSG YWKAKGSERK IVSSSSDAVG LVGMRKTLVF WMGSSSSRKT  120
GWVMHEYRLL LSPTQAPTPP SVVINNMEKW VVCRIVCNNS GIKNDLHFHP LQYPVSASTN  180
DDTNALSDDS VSSTASSSSF SATTTMPFPN HHSSASN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.14e-37NAC family protein