PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988733.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 543aa MW: 57927.5 Da PI: 6.95

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.5	3.6e-30	303	361	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+H h+ XP_022988733.1 303 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHSHP 361 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MEAAAPSPPP PPPPTATLQF PVNLNSTLHE PPPSPPPSPP PSPPPPLPFF HSHRALFDEM 60 NFFAADDKSR VLISAADSKL RASDNLSPTK LDFQVNVGHP LNFLTGLNLL TTNYSSDQSM 120 VDDGISSNPQ DTKTKNERAV LQAELERVNT ENQRLKDTLN QVTSNYQSLQ MQFTTLIQTQ 180 KAAAAGDSTD EKAGDQETIR HGGGNNGNNL VPRQFMDLGL ATNVDIDEPS MSSSEGRSDR 240 SPGTTGEVAS SKRHSPDQGS NLGSNKASKF SSSSSGKDVD QTEATMRKAR VSVRARSEAP 300 MITDGCQWRK YGQKMAKGNP CPRAYYRCTM AAGCPVRKQV QRCAEDKTIL ITTYEGNHSH 360 PLPPAAMAMA STTSSAARML LSGSMSSADG LMNPNFLART LLPCSSSMAT ISASAPFPTV 420 TLDLTQTPNP LFQRPTPGHF PIPFAAGPTQ SFPQIFGHAL YNQSKFSGLQ MSKEIEAPTP 480 PPPSQNPLAD TLSAASAAIA SDPNFIAALA SAMTSLIGGS HHQKENGNGN NNVDNNTTSN 540 SQQ

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MEAAAPSPPP PPPPTATLQF PVNLNSTLHE PPPSPPPSPP PSPPPPLPFF HSHRALFDEM  60
NFFAADDKSR VLISAADSKL RASDNLSPTK LDFQVNVGHP LNFLTGLNLL TTNYSSDQSM  120
VDDGISSNPQ DTKTKNERAV LQAELERVNT ENQRLKDTLN QVTSNYQSLQ MQFTTLIQTQ  180
KAAAAGDSTD EKAGDQETIR HGGGNNGNNL VPRQFMDLGL ATNVDIDEPS MSSSEGRSDR  240
SPGTTGEVAS SKRHSPDQGS NLGSNKASKF SSSSSGKDVD QTEATMRKAR VSVRARSEAP  300
MITDGCQWRK YGQKMAKGNP CPRAYYRCTM AAGCPVRKQV QRCAEDKTIL ITTYEGNHSH  360
PLPPAAMAMA STTSSAARML LSGSMSSADG LMNPNFLART LLPCSSSMAT ISASAPFPTV  420
TLDLTQTPNP LFQRPTPGHF PIPFAAGPTQ SFPQIFGHAL YNQSKFSGLQ MSKEIEAPTP  480
PPPSQNPLAD TLSAASAAIA SDPNFIAALA SAMTSLIGGS HHQKENGNGN NNVDNNTTSN  540
SQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-108	WRKY family protein