PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988734.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 535aa MW: 57049.5 Da PI: 6.9029

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988734.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.5	3.6e-30	295	353	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+H h+ XP_022988734.1 295 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHSHP 353 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MEAAAPSPPP PPPPTATLQF PVNLNSTLHE PPPSPPPSPP PSPPPPLPFF HSHRALFDEM 60 NFFAADDKSR VLISAADSKL RASDNLSPTK LDFQVNTGLN LLTTNYSSDQ SMVDDGISSN 120 PQDTKTKNER AVLQAELERV NTENQRLKDT LNQVTSNYQS LQMQFTTLIQ TQKAAAAGDS 180 TDEKAGDQET IRHGGGNNGN NLVPRQFMDL GLATNVDIDE PSMSSSEGRS DRSPGTTGEV 240 ASSKRHSPDQ GSNLGSNKAS KFSSSSSGKD VDQTEATMRK ARVSVRARSE APMITDGCQW 300 RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK QVQRCAEDKT ILITTYEGNH SHPLPPAAMA 360 MASTTSSAAR MLLSGSMSSA DGLMNPNFLA RTLLPCSSSM ATISASAPFP TVTLDLTQTP 420 NPLFQRPTPG HFPIPFAAGP TQSFPQIFGH ALYNQSKFSG LQMSKEIEAP TPPPPSQNPL 480 ADTLSAASAA IASDPNFIAA LASAMTSLIG GSHHQKENGN GNNNVDNNTT SNSQQ

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MEAAAPSPPP PPPPTATLQF PVNLNSTLHE PPPSPPPSPP PSPPPPLPFF HSHRALFDEM  60
NFFAADDKSR VLISAADSKL RASDNLSPTK LDFQVNTGLN LLTTNYSSDQ SMVDDGISSN  120
PQDTKTKNER AVLQAELERV NTENQRLKDT LNQVTSNYQS LQMQFTTLIQ TQKAAAAGDS  180
TDEKAGDQET IRHGGGNNGN NLVPRQFMDL GLATNVDIDE PSMSSSEGRS DRSPGTTGEV  240
ASSKRHSPDQ GSNLGSNKAS KFSSSSSGKD VDQTEATMRK ARVSVRARSE APMITDGCQW  300
RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK QVQRCAEDKT ILITTYEGNH SHPLPPAAMA  360
MASTTSSAAR MLLSGSMSSA DGLMNPNFLA RTLLPCSSSM ATISASAPFP TVTLDLTQTP  420
NPLFQRPTPG HFPIPFAAGP TQSFPQIFGH ALYNQSKFSG LQMSKEIEAP TPPPPSQNPL  480
ADTLSAASAA IASDPNFIAA LASAMTSLIG GSHHQKENGN GNNNVDNNTT SNSQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-115	WRKY family protein