PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988914.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 249aa MW: 28266.3 Da PI: 8.0401

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.7	4.2e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd++l+ +v+++G +W++ ++ g+ R++k+c++rw +yl XP_022988914.1 15 KGVWTLEEDQKLISYVNRYGHWNWRRLPKFAGLSRCGKSCRLRWMNYL 62 799***************99**********************97 PP
2	Myb_DNA-binding	48.2	2.5e-15	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g +++ E+e++v+ + Gg+ W+t a+ m+ gRt++++k++w+++l XP_022988914.1 68 KGGFSKKEEEIIVKMYAAIGGR-WSTMASLMP-GRTDNHIKNHWNTVL 113 5779****************.*****.**********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MAKCCCCCDR TQVKKGVWTL EEDQKLISYV NRYGHWNWRR LPKFAGLSRC GKSCRLRWMN 60 YLRPDIRKGG FSKKEEEIIV KMYAAIGGRW STMASLMPGR TDNHIKNHWN TVLKRRVLQK 120 NVSRTMANKP PPPPPPPPSP PLPPATTSPI HEGFSGESLS SNDNSTLIID STALESVLIQ 180 TIETPTAGNI DMLPANDRPP VSSSGDFWTD PLWLDSDFDL PFDYQYQGLG EPIVSKFGLD 240 EYIFQEELY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28110.1	1e-51	MYB family protein