PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988946.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 214aa MW: 23620.2 Da PI: 9.2762

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988946.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15	7.2e-05	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ksFs+ L H ++H XP_022988946.1 53 YSCSVCNKSFSSYQALGGHKSSH 75 99************999999988 PP
2	zf-C2H2	11.7	0.00081	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k+F++ L H r+H XP_022988946.1 105 HQCSICFKCFPTGQALGGHKRRH 127 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MALQALNSPT EPWIKRSKRS SRPPLDSDDE HLAFSLLMLA HGGNIPSPTK LPYSCSVCNK 60 SFSSYQALGG HKSSHRKSDA IDTDSTSATT TSAVSSSTAA STRTHQCSIC FKCFPTGQAL 120 GGHKRRHYDG NNNKTLAAGS DSNGDSTLTQ THVRDFDLNV PALPEFWPRF PDSHRREKSQ 180 SQSQSQSQRR EKYVEEEVQS PHPLKKPRLL VPVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	5e-38	C2H2 family protein