PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022989135.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 659aa MW: 74659.5 Da PI: 4.8734

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022989135.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.2e-12	400	443	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++N+++ +Lr l+Pk + K++Ka+iL A++++k+Lq XP_022989135.1 400 VAERKRRKKLNERLYNLRALVPKiS------KMDKASILGDAIDFVKELQ 443 68*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 659 aa Download sequence
MLFLTIFCLL SMNAGDINHS IVIMQTLMER LRPLVGSKSW DYCVLWKLSQ DQRCIEWVDC 60 CCAGTENNQN GGEEHVFPCR DTLSPHPRAS SCDLLAQLPC SVPLNSGYFI YIYHSTYPTS 120 LPHLSLNFSL LNRVYIQTLL SNEPRWLLFS NGTDSTALEE TMGTRVLIPF PFGLVELFVA 180 KHASEDQHVI DFVTTQCSIS IEQGAIINSS NMDTSFSVDV NATNEIQSKP FVADQNVVIE 240 DPENQFEAPG STAPTLENAN VGYEISLDRI RLCSSPMNFL QQFNYSSENR NKNEIFHECS 300 QDAFHTDKQG NPYKFSAENE FQEVDIMQGS LMNNTSNIHM QFKENTECKE QQGEEKDLVK 360 NENGRSDSVS DCSDQIDDED DAVAKYRRRT GQGPQSKNLV AERKRRKKLN ERLYNLRALV 420 PKISKMDKAS ILGDAIDFVK ELQKQVKELQ DELEEHSDDE NGKIVGTGND GNKTSVQLPE 480 FLSQNDKAQN SYHIGVLGSG SLLKQNHQDT EGTNNDKTQQ MEPQVEVAQI DGNEFFVKVF 540 CENKRGGFMR LMEALNALGL EVTNANVTSY RGLVSNVFKV GKKDSELVQA DDVRDSLLEI 600 TKYPCRGWSE MVKQPECSVS RMDYQTHPHT HQHQHQHQIQ IQHPFLDKAI NSRLHLLDD

Sequence ? help Back to Top

Protein Sequence Length: 659 aa Download sequence

MLFLTIFCLL SMNAGDINHS IVIMQTLMER LRPLVGSKSW DYCVLWKLSQ DQRCIEWVDC  60
CCAGTENNQN GGEEHVFPCR DTLSPHPRAS SCDLLAQLPC SVPLNSGYFI YIYHSTYPTS  120
LPHLSLNFSL LNRVYIQTLL SNEPRWLLFS NGTDSTALEE TMGTRVLIPF PFGLVELFVA  180
KHASEDQHVI DFVTTQCSIS IEQGAIINSS NMDTSFSVDV NATNEIQSKP FVADQNVVIE  240
DPENQFEAPG STAPTLENAN VGYEISLDRI RLCSSPMNFL QQFNYSSENR NKNEIFHECS  300
QDAFHTDKQG NPYKFSAENE FQEVDIMQGS LMNNTSNIHM QFKENTECKE QQGEEKDLVK  360
NENGRSDSVS DCSDQIDDED DAVAKYRRRT GQGPQSKNLV AERKRRKKLN ERLYNLRALV  420
PKISKMDKAS ILGDAIDFVK ELQKQVKELQ DELEEHSDDE NGKIVGTGND GNKTSVQLPE  480
FLSQNDKAQN SYHIGVLGSG SLLKQNHQDT EGTNNDKTQQ MEPQVEVAQI DGNEFFVKVF  540
CENKRGGFMR LMEALNALGL EVTNANVTSY RGLVSNVFKV GKKDSELVQA DDVRDSLLEI  600
TKYPCRGWSE MVKQPECSVS RMDYQTHPHT HQHQHQHQIQ IQHPFLDKAI NSRLHLLDD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	387	408	RRRTGQGPQSKNLVAERKRRKK
2	402	409	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-122	bHLH family protein