PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022989218.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SBP
Protein Properties Length: 190aa    MW: 21306.2 Da    PI: 9.3894
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022989218.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.76.2e-4267144178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cq+e+C+adlseak yhrrhkvCevh+k++vvlv g +qrfCqqCsrfhelsefDe krsCrrrLa+hnerrrk +a
  XP_022989218.1  67 CCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEMKRSCRRRLAGHNERRRKISA 144
                     6**************************************************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDVGKIETTH QQKQRVVMEK GRVKEDMVVV DEDGEYDEDK KRKGVIVSVG GGGSGKKAAG  60
GGGGMRCCQA EKCTADLSEA KPYHRRHKVC EVHAKSQVVL VGGFRQRFCQ QCSRFHELSE  120
FDEMKRSCRR RLAGHNERRR KISAESNAEC SIRKGTGAQM KDSVCGQADD QGRIQMTIQE  180
NAAYKHFQIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.12e-46SBP family protein