PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022989259.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 271aa MW: 29787.1 Da PI: 8.4702

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022989259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	106.9	3.2e-33	21	103	2	74
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssasec.e 74 +++kdrhsk+ T++g+RdRRvRlsa++a+rf+d+qd+LG+d++sk+++WL+++ak ai++l ++ +++++++ e XP_022989259.1 21 TARKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDQLGYDRPSKAVDWLIKKAKFAIDKLRELppyspiahgFADPNRKTgE 103 789************************************************************97776666642222222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MKTSAAAEIV PVQGGHIIRS TARKDRHSKV FTAKGPRDRR VRLSAHTAIR FYDVQDQLGY 60 DRPSKAVDWL IKKAKFAIDK LRELPPYSPI AHGFADPNRK TGERETESTE LQSAVGHFAP 120 SLEPFFPTTS ATTSINFQGY PVDLILTPTD PPRDLALSLH NFHDSRLIPS EQNANSSPGN 180 YQRLIGDSIP AGYEGGDAGL WLQQPLMEQN STAAFSQVPM HGWSNQIRQS AGHGGRFEGP 240 SEFCTPSRIR GEGVEDGVVS GSHSSSPNYH R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	3e-46	TCP family protein