PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022989398.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 424aa    MW: 47065 Da    PI: 6.561
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022989398.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.92.5e-29109165259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK vkg+ f rsYYrCt+++C+vkk++er++ d+k+++i+Y g H+h+
  XP_022989398.1 109 EDGYNWRKYGQKLVKGNVFVRSYYRCTHPTCMVKKQLERTH-DGKITDIIYFGPHDHP 165
                     7***************************************9.***************8 PP
2WRKY106.61.3e-33281339159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK vkg+++prsYYrC+s+gCpvkk+ver+++dpkvv +tYeg+H+h+
  XP_022989398.1 281 VNDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDPKVVLTTYEGHHDHD 339
                     58********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MVSSGDQIET KVDSDRLEHE QSSFSQSQAS QEDPGGTNAS NSDHKSTAAS RETLEEAVKQ  60
PDVTIPLVDR DISNVVSEKV TQNPIHADQD SHPDLKVSIT STIREKVSED GYNWRKYGQK  120
LVKGNVFVRS YYRCTHPTCM VKKQLERTHD GKITDIIYFG PHDHPRPQPH IPVAVGVVNM  180
VEEKLDDHAS RSSQDKTSTA LGQTPRKTEP GDALQLSIDM ANDKEKDEGS KRSRINDEVD  240
SDDTRDLKRE KKICNIDVTV ADKSTVESRV VVQTPSEVDI VNDGYRWRKY GQKLVKGNPN  300
PRSYYRCSSP GCPVKKHVER ASHDPKVVLT TYEGHHDHDM PPARTVTLNS AGSTAAHSDE  360
MKTKMVGSSI GQDTVVHANK DPQSNSSSEG KLIETNGKSN ATEASDRIVL DMVVYQARSF  420
ECSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.27e-94WRKY family protein