PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022989484.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 157aa    MW: 16953.3 Da    PI: 9.8664
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022989484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.13.2e-202558134
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                    C+ C+ttkTplWR gp g+k+LCnaCG+++rk++
  XP_022989484.1 25 CVDCNTTKTPLWRGGPAGPKSLCNACGIRFRKRR 58
                    ********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MGMMDVTQKG LSPRTQLQDQ TKKCCVDCNT TKTPLWRGGP AGPKSLCNAC GIRFRKRRIS  60
TNRGYVRKRE RPHSSTTSSS SSSGTTAINT TTSGGGSGDG EEDLGECRSL RMRVMMPFRE  120
EVVVVQNVSS VQKQGKLGEE EQAAVLLMAL SCGSVFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.12e-24GATA family protein