PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022989537.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 176aa MW: 19702.4 Da PI: 8.2854

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022989537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.0008	51	70	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cg+ F++ L H+r XP_022989537.1 51 PCTECGRKFRSDKALFGHMR 70 5******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MVKTTVSASK RRRIACKKRS TKENDSAAVT VGSKAKYRKK PESIEPKITP PCTECGRKFR 60 SDKALFGHMR CHPERKWRGI NPPLCFRRSI SVSPSSPVLD FEESSITEEE QNIADCLIML 120 ANGLNFIDRA SDWENESAHE EVCVNFDLNM PAPVEDSSSS SYSSFSAITL DLRLGL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	10	14	KRRRI
2	10	36	KRRRIACKKRSTKENDSAAVTVGSKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	5e-27	C2H2 family protein