PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022989714.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 249aa    MW: 27786.5 Da    PI: 9.5535
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022989714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.11.6e-31161351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp+G+rF Ptdeelv +yLk+k+ + +l++ +vi+++d++ ++P+ +p  +   +++ +fFsk+++        +r t  g+Wk+tgk+k ++++
  XP_022989714.1  16 LPVGYRFCPTDEELVEHYLKRKAFDLPLPA-SVIPDFDVFLTDPSAFPGDF---KEKRFFFSKQRSF------LRRNTGCGIWKSTGKEKLIVNQ 100
                     799***************************.99***************554...3467899887765......57899****************8 PP

             NAM  96 .kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                       +++vgl+k+Lvfy+   ++++  t+Wvmheyrl
  XP_022989714.1 101 gINKVVGLRKSLVFYESkVSERTATTRWVMHEYRL 135
                     65678**********76256677899*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MEKASNFVIN GGMMRLPVGY RFCPTDEELV EHYLKRKAFD LPLPASVIPD FDVFLTDPSA  60
FPGDFKEKRF FFSKQRSFLR RNTGCGIWKS TGKEKLIVNQ GINKVVGLRK SLVFYESKVS  120
ERTATTRWVM HEYRLPRSGS VSATTTPNST QLEMEDWAVY SLFQNRRRPK KKEGRKVAQG  180
SVMGLLRMEN GGEFSQPCSS CSSGVTQVSS NGTESTDQEE SSSDLGLGLG LGLGLGFSSS  240
YYEAHVRGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14000.12e-40NAC family protein