PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022989899.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 436aa MW: 47431.4 Da PI: 6.6477

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022989899.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56	9.4e-18	50	97	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl XP_022989899.1 50 KGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWINYL 97 79********************************************97 PP
2	Myb_DNA-binding	52.6	1e-16	103	148	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_022989899.1 103 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 148 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MPLPISSFTN HTHSLTHSLS SSSSSSSSSS SSSSSPMGRS PCCDKVGLKK GPWTPEEDQK 60 LLAYIEEHGH GSWRALPSKA GLQRCGKSCR LRWINYLRPD IKRGKFSLQE EQTIIQLHAL 120 LGNRWSAIAT HLPKRTDNEI KNYWNTHLKK RLAKMGIDPV THKPKNDALL TGDGQPKSAA 180 NLSHIAQWES ARLEAEARLV RESRLRNNNS HSSLQQLPNP PCFPPSSSST STSAQLLPNS 240 DSPAAMASRS LEALKAWNNG WSKSAEGTGG ILTRVIGGDL ESPTSTLTFS ENVLPVMATG 300 CGEGENSAAM IEFVGSSSSC EREWKEEGFG NSSQLPEYKE GFENSMSFTS HDMTLSIEAT 360 WTAESLRTKE AIAEEGFTNL LLNNKVERSQ SEGGGGGEDS ENGSGSAASD YYEDNKNYWN 420 SILNLVNSSP SNSSIF

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MPLPISSFTN HTHSLTHSLS SSSSSSSSSS SSSSSPMGRS PCCDKVGLKK GPWTPEEDQK  60
LLAYIEEHGH GSWRALPSKA GLQRCGKSCR LRWINYLRPD IKRGKFSLQE EQTIIQLHAL  120
LGNRWSAIAT HLPKRTDNEI KNYWNTHLKK RLAKMGIDPV THKPKNDALL TGDGQPKSAA  180
NLSHIAQWES ARLEAEARLV RESRLRNNNS HSSLQQLPNP PCFPPSSSST STSAQLLPNS  240
DSPAAMASRS LEALKAWNNG WSKSAEGTGG ILTRVIGGDL ESPTSTLTFS ENVLPVMATG  300
CGEGENSAAM IEFVGSSSSC EREWKEEGFG NSSQLPEYKE GFENSMSFTS HDMTLSIEAT  360
WTAESLRTKE AIAEEGFTNL LLNNKVERSQ SEGGGGGEDS ENGSGSAASD YYEDNKNYWN  420
SILNLVNSSP SNSSIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	1e-107	MYB family protein