PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022990388.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 370aa    MW: 39855.1 Da    PI: 7.6074
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022990388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-20184233255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  XP_022990388.1 184 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 233
                     7********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MCLLKVANRR GIGGDLGPFP SGGGNGDGHN GNKLFSSQHN DRDYYCAVGE VSAMVSVLTD  60
VVSGVGAADS NYSGGQVFSS SSSTSTSSPL SSFSSEPSYV SAMSSWVGQK RLREGENAET  120
EPNFDSLSRV FSGFNGQSSS AVIPAMKEEV PSPYTGISNP GTAVAASPMI EIAAATAASD  180
RRRRYRGVRQ RPWGKWAAEI RDPHKAARVW LGTFDTAEAA ARAYDEAALR FRGNKAKLNF  240
PENVGLLPLQ QHIPLSTPQF VPPRTAALQI QNYRDYMEYS NFLQSSGDLL GQPSSLLQQM  300
YYNAHLTPFQ YLPAPAPSLS SVSNSVFIPP QQQQQQMGLF RPPRSQNQNQ DGSDYFPGTS  360
WNDSGGPSSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180185DRRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.11e-16ERF family protein