PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022990420.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 298aa    MW: 32274 Da    PI: 6.3551
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022990420.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.2e-18207240134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C +tkTp+WR gp g+ktLCnaCG++y++ +
  XP_022990420.1 207 CLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGR 240
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDCGNFFDQI DDLLDFPTED FDDDDGALTT NAASFPPIWS SASLPHAADS VFSGNTPHSA  60
LSVPYEDIDQ LEWLSNFIDD SSSGAETLTI NTSSLSPANQ FQISSPVSVL DSSSSSSSSC  120
SGEKKTLAVA GKRGRARSKR SRPPSFIPRP PQLISPTNSG GKVSSDSENY GESCSAPPLP  180
VKKTKKIKLS FRRDQNDAFS PQGVRKCLHC EVTKTPQWRA GPLGPKTLCN ACGVRYKSGR  240
LFPEYRPAAS PTFVPCLHSN SHRKVLEMRT KQEEIAVETE LPTELIPNTN SGIVLGYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.25e-41GATA family protein