PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990636.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 519aa MW: 56380.9 Da PI: 5.5528

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.5	2.7e-09	335	383	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_022990636.1 335 NSHSLAERVRREKISERMRLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 383 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MNGKDEFEDE CRTSDPMSIS SSWQFANESI GFVSTGNPSV VNNGDLVVSS CPSTSMSNLF 60 TPTVLNDHTN SQSSRFCSGF NEPNSIDDSN VTVVDGEGLS SLRSSSDRIL GMDWNQQSSW 120 MKGVFSANVP GMFPANLSQL PADSAFIERA ARFSCFNGGV FGAPPSGPFG ISGSIGIHSR 180 GAFGSQELNK VVLEAKEKSP PKTEKESEMS RDRAKQGCVG ESGNESDETG FSGGQDEQCT 240 LGGTIAEPSR EGLCFKKRKR GDRNMELAQV KEAPKQINET AKNGALTRQN GDKDQNPSFT 300 TNKPAGKQGK QDSQPSDVPK EEYIHVRARR GQATNSHSLA ERVRREKISE RMRLLQDLVP 360 GCSKVTGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPKL DFNIEELLTK EIMQSKAGPS 420 LFGFPPDLPM PYLPQHPTHH GVIPPCIPNM GSSPDLLRRT INSQLASLGG GFKEPVQLPN 480 VWENELHNVV PRNFDVAAPP SGQDVDGSTP PCNNTRAEL

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MNGKDEFEDE CRTSDPMSIS SSWQFANESI GFVSTGNPSV VNNGDLVVSS CPSTSMSNLF  60
TPTVLNDHTN SQSSRFCSGF NEPNSIDDSN VTVVDGEGLS SLRSSSDRIL GMDWNQQSSW  120
MKGVFSANVP GMFPANLSQL PADSAFIERA ARFSCFNGGV FGAPPSGPFG ISGSIGIHSR  180
GAFGSQELNK VVLEAKEKSP PKTEKESEMS RDRAKQGCVG ESGNESDETG FSGGQDEQCT  240
LGGTIAEPSR EGLCFKKRKR GDRNMELAQV KEAPKQINET AKNGALTRQN GDKDQNPSFT  300
TNKPAGKQGK QDSQPSDVPK EEYIHVRARR GQATNSHSLA ERVRREKISE RMRLLQDLVP  360
GCSKVTGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPKL DFNIEELLTK EIMQSKAGPS  420
LFGFPPDLPM PYLPQHPTHH GVIPPCIPNM GSSPDLLRRT INSQLASLGG GFKEPVQLPN  480
VWENELHNVV PRNFDVAAPP SGQDVDGSTP PCNNTRAEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	4e-85	bHLH family protein