PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990689.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

LBD

Protein Properties

Length: 273aa MW: 30976.7 Da PI: 4.6705

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	134.1	5.2e-42	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCa+Ck++rr+C+kdC+lapyfpa+qpk f+n+h+lFG++n++++lk++p+++++++m+s++ye+++r r PvyG++gv+++l+ q++q+++el+ XP_022990689.1 10 ACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQ 104 7*********************************************************************************************9 PP DUF260 96 llke 99 ++k+ XP_022990689.1 105 QVKA 108 9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MTMKGGTTQA CASCKYQRRR CSKDCPLAPY FPADQPKMFQ NAHRLFGVRN IMNILKQVPP 60 SQKDETMTSI IYESNMRSRF PVYGCCGVLW QLHYQIQQVS EELQQVKARV SMMKDLGIAD 120 DNNVVFPVYT QQQPPQQQQQ YDCLGVDGND LLFGNVNNGG VYVDNDDHND IGSMLKELRI 180 QQHYNDNFGI NVESMLMQSN LIPAVLQHEM EISHDYDEIP FDTIADDRQS YVESKEACNS 240 SAESTFKDVS ESSAEYLSRT DLKNAAACFS LTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	5e-46	LBD family protein