PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022990778.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 334aa    MW: 37656.6 Da    PI: 9.585
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022990778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP143.21.9e-44842072135
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaak 96 
                     + kkdrhski+T++g+RdRRvRls+e+ ++fFdLqd+LG+dk+skt++WLl+++ +aikelt++++ ++ +  + +s         + +a +++ 
  XP_022990778.1  84 TMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTKSRKAIKELTNNNNHNN-NLYNFDS---------EFEAHKTTL 168
                     689*************************************************************55555.3322222.........233445668 PP

             TCP  97 skksqksaasalnlakesrakarararertrekmriknk 135
                     +k+ +k+ a +  lakesrakarararert+ek + k++
  XP_022990778.1 169 PKSCKKNVAFHDVLAKESRAKARARARERTKEKIMSKSQ 207
                     88899999999**********************998865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MFSSTNNLHL FPLQHYFVPS SSSSYHHLVP PPASAVASPA NNVFVPQDLQ NPFVVVGEEA  60
RMKNEQEGQC YSSGVNNLVN KKSTMKKDRH SKIYTAQGLR DRRVRLSIEI SRKFFDLQDM  120
LGYDKASKTL DWLLTKSRKA IKELTNNNNH NNNLYNFDSE FEAHKTTLPK SCKKNVAFHD  180
VLAKESRAKA RARARERTKE KIMSKSQQAL PEIFSHQFHS PPPPPPPPPA SSPSSSIPVV  240
QKAAALGASS LDQENNIIGI MWKPSPMITK GDIYYNNCNN FYFPPNLPPN WDINIDSFAR  300
PQSGFCSIAN MDSLPEFQVC AKPWDSCSNN QHLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.22e-29TCP family protein