PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990810.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 550aa MW: 62247.4 Da PI: 8.3368

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	46.1	1.1e-14	241	292	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r++W+ e ++F +a+++LG +k Pk il+lm+ ++Ltl +v+ HLQkY+ XP_022990810.1 241 SRVVWNVERRRKFSDALNKLG--DKCRPKLILKLMNEPCLTLRQVANHLQKYKA 292 79****************5..889************************85 PP
2	Myb_DNA-binding	23	1.9e-07	244	291	3	48
SS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 W e ++ da ++lG + ++k+I + m+ +tl q+ +++qky+ XP_022990810.1 244 VWNVERRRKFSDALNKLGDKcRPKLILKLMNePCLTLRQVANHLQKYK 291 677777789*******99********999**********7 PP
3	Response_reg	50	1.6e-17	18	123	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 +l+vd e l ++ l ++l+++ y +v+++ g al +++ek +Dl++ ++mp+md + ll + + + + +i+++++ + + a++al G XP_022990810.1 18 ILVVDHETLSLKHLSSLLRQQSY-NVTTTGLGCIALSMIQEKGdqFDLVMANVSMPDMDSFSLLHVLLKMN--IAVIFMSSTMNLKVATKALAEG 109 89*******************.***********999889******************8865..****************** PP ESEEEESS--HHHH CS Response_reg 94 akdflsKpfdpeel 107 a fl Kp+++++l XP_022990810.1 110 ACYFLQKPISKNDL 123 ********9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MGHWVPDSLP SFAKKLHILV VDHETLSLKH LSSLLRQQSY NVTTTGLGCI ALSMIQEKGD 60 QFDLVMANVS MPDMDSFSLL HVLLKMNIAV IFMSSTMNLK VATKALAEGA CYFLQKPISK 120 NDLKYVWQHV YRSNINLAKL THKANCIEKA KSGQELIDFQ KDNTVVLSRS TDAASYNNNY 180 SINYQLMSHN EKVQNTPTTS HDTLVASYFE GKRSTDDIEG TKADEDNGRG KEYYISRNTR 240 SRVVWNVERR RKFSDALNKL GDKCRPKLIL KLMNEPCLTL RQVANHLQKY KAQVESIKKG 300 KKNKLAPRME ASKFDCSVKT QLPPLVLRQQ NHEANKSIQQ NHEANKSTQQ NHEANKSTQG 360 GSTSLSGGKR FRLIAPKPAL NPRLLVSANF VNHGLRMLDH NFQHVASNYN SVPYSINKTT 420 PEVTSYRAFD EIQFPDMHQV DVAQQLEAME FIGTSEGIQL MSKNIALPDS TNLDNIAANF 480 GNEGSQQQFA EYDYLLNVLE DDPYDLRNDF SLSDVDKYSE WLRNTVLENG SSLDSLINDN 540 LENFPVKINQ

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MGHWVPDSLP SFAKKLHILV VDHETLSLKH LSSLLRQQSY NVTTTGLGCI ALSMIQEKGD  60
QFDLVMANVS MPDMDSFSLL HVLLKMNIAV IFMSSTMNLK VATKALAEGA CYFLQKPISK  120
NDLKYVWQHV YRSNINLAKL THKANCIEKA KSGQELIDFQ KDNTVVLSRS TDAASYNNNY  180
SINYQLMSHN EKVQNTPTTS HDTLVASYFE GKRSTDDIEG TKADEDNGRG KEYYISRNTR  240
SRVVWNVERR RKFSDALNKL GDKCRPKLIL KLMNEPCLTL RQVANHLQKY KAQVESIKKG  300
KKNKLAPRME ASKFDCSVKT QLPPLVLRQQ NHEANKSIQQ NHEANKSTQQ NHEANKSTQG  360
GSTSLSGGKR FRLIAPKPAL NPRLLVSANF VNHGLRMLDH NFQHVASNYN SVPYSINKTT  420
PEVTSYRAFD EIQFPDMHQV DVAQQLEAME FIGTSEGIQL MSKNIALPDS TNLDNIAANF  480
GNEGSQQQFA EYDYLLNVLE DDPYDLRNDF SLSDVDKYSE WLRNTVLENG SSLDSLINDN  540
LENFPVKINQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	248	253	ERRRKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	1e-38	ARR-B family protein