PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991177.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 273aa MW: 30765.7 Da PI: 5.9519

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.8e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g+ R++k+c++rw +yl XP_022991177.1 14 KGPWTAEEDKKLINFLHTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	46.9	6.5e-15	71	111	5	47
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ E++ +d++ +G++ W++Ia++++ gRt++++k++w+++ XP_022991177.1 71 SEYEEKMVIDLHSHMGNR-WSKIASHLP-GRTDNEIKNHWNTH 111 6779************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MGRQPCCDKV GLKKGPWTAE EDKKLINFLH TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SEYEEKMVID LHSHMGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLKKMG 120 IDPQTHKPVS PLSDDAHLAH KNDQKSQQQQ FPSLPSPSRA LKEHDKETVI DETDVMDLLV 180 DGFCMEEDVS LIEPPQEVVV PCASSSSTIS TPSSSTPSSS SSFCSHSESA ANLLQDLVNE 240 FPEFEWPNIC ENGLVDELLE DDFGGWDFII NNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66230.1	4e-89	MYB family protein