PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022991506.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 263aa    MW: 29970.8 Da    PI: 6.1489
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022991506.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.41.7e-181966148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd  l ++v+ +G g+W+++ar+ g++Rt+k+c++rw++yl
   XP_022991506.1 19 KGPWTVEEDAVLFNYVHSHGEGRWNAVARCTGLKRTGKSCRLRWLNYL 66
                     79********************************************97 PP
2Myb_DNA-binding47.73.5e-1572115146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E++l++d++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022991506.1  72 RGNITLQEQLLILDLHFRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 115
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MDVKMRGFTA EEAEEGVRKG PWTVEEDAVL FNYVHSHGEG RWNAVARCTG LKRTGKSCRL  60
RWLNYLRPSV KRGNITLQEQ LLILDLHFRW GNRWSKIAQY LPGRTDNEIK NYWRTRVQKQ  120
AKQLKCDVNS KQFRDAMRYV WMPRLLERIQ ASTDSVTDVA VSASTDVVLS LEQTQPSPSR  180
SSWVNPHVTP STSSSDSVSN KVQLQVFPVS NVMEDFSLVG TSEEEGMMMV VQQGCDGEAT  240
NGWIGGGELL EDGFWDGEDM WFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.17e-81MYB family protein