PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991549.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 696aa MW: 77231.3 Da PI: 6.6324

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.5	3.9e-21	554	651	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++r+W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ +++ XP_022991549.1 554 QKVLKQSDVGNLGRIVLPKKEAETHlpELEARDGISIAMEDiGTSRVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvKCG 645 79***********************999999****7778*****777777777777.******************..566999 PP ..EEEE CS B3 91 elvvkv 96 +++++ XP_022991549.1 646 KYMIRG 651 888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 696 aa Download sequence
MKEVHDLDLH AEMDQTQMWV HDQNQQQHQN HQIFLSDNDD DALIFYSDFP PLPDFPCMSS 60 SSSSTPAPVK PTVSLSSSSS TSSSSSATSW AVLKSDADEI AEEIRINDNN SASATTTAAA 120 AASAAVSSPS AVKTEFNGGD CTDDMMMETF GYMDLLEDSN EFFDPTCIFQ NEEQQQQQRD 180 PLEDLRLESF EEVEMEDLMM MHGGKSNDNG GKQNVAAAAA AAEEEDMAKV FLEWLRSNRE 240 TVSADDLRNV RIKKATIESA ARRLGGGKEG MKQLLKLVLE WVQTNHLQKR KFKEINENEA 300 NLIGFQSPNS SGHPWIQTPP PLPPPPLYSP PILGYVQGGG GEAYGSGRGY SDHYQLLDSS 360 LSWSNSNSNS NLPGAVQLPR SHFNSFVDNF VAGPPLPPPQ QQGFAAGYGR GQQYPYMGQY 420 FQAQGGDNGL VRLDSSATKE ARKKRMARQR RFSAHHRHNH GGHHGNHHHH HSNSHQHQMN 480 PNASDHGNMA TTSQSNAGNW VYWPSSTDVV PADSPVHAVN WSNSSLQNQP YPPRIQSERR 540 QGWKPEKNLR FLLQKVLKQS DVGNLGRIVL PKKEAETHLP ELEARDGISI AMEDIGTSRV 600 WNMRYRYWPN NKSRMYLLEN TGDFVRANGL QEGDFIVIYS DVKCGKYMIR GVKVRQPGSK 660 PDSKRGGKSQ RSHSTAGVNA NGLSSSPPTP ATPRRH

Sequence ? help Back to Top

Protein Sequence Length: 696 aa Download sequence

MKEVHDLDLH AEMDQTQMWV HDQNQQQHQN HQIFLSDNDD DALIFYSDFP PLPDFPCMSS  60
SSSSTPAPVK PTVSLSSSSS TSSSSSATSW AVLKSDADEI AEEIRINDNN SASATTTAAA  120
AASAAVSSPS AVKTEFNGGD CTDDMMMETF GYMDLLEDSN EFFDPTCIFQ NEEQQQQQRD  180
PLEDLRLESF EEVEMEDLMM MHGGKSNDNG GKQNVAAAAA AAEEEDMAKV FLEWLRSNRE  240
TVSADDLRNV RIKKATIESA ARRLGGGKEG MKQLLKLVLE WVQTNHLQKR KFKEINENEA  300
NLIGFQSPNS SGHPWIQTPP PLPPPPLYSP PILGYVQGGG GEAYGSGRGY SDHYQLLDSS  360
LSWSNSNSNS NLPGAVQLPR SHFNSFVDNF VAGPPLPPPQ QQGFAAGYGR GQQYPYMGQY  420
FQAQGGDNGL VRLDSSATKE ARKKRMARQR RFSAHHRHNH GGHHGNHHHH HSNSHQHQMN  480
PNASDHGNMA TTSQSNAGNW VYWPSSTDVV PADSPVHAVN WSNSSLQNQP YPPRIQSERR  540
QGWKPEKNLR FLLQKVLKQS DVGNLGRIVL PKKEAETHLP ELEARDGISI AMEDIGTSRV  600
WNMRYRYWPN NKSRMYLLEN TGDFVRANGL QEGDFIVIYS DVKCGKYMIR GVKVRQPGSK  660
PDSKRGGKSQ RSHSTAGVNA NGLSSSPPTP ATPRRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	6e-92	B3 family protein