PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991637.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 390aa MW: 44893.4 Da PI: 4.7336

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.6	2.2e-34	65	156	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++ei++d +++++isws gnsfvv+d++ f++++Lp++Fkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+k+ll++ XP_022991637.1 65 FLTKTFEIVDDFNTDHVISWSFGGNSFVVWDPHCFSTELLPRFFKHNNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFLRGQKHLLKN 150 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr++ XP_022991637.1 151 IKRRRA 156 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MNLLFEHWGG ICMVDLYAIV AEMNPLFPVK EEFPGSNSSE TDRERLAMAP PIPMEGLHDA 60 GPPPFLTKTF EIVDDFNTDH VISWSFGGNS FVVWDPHCFS TELLPRFFKH NNFSSFVRQL 120 NTYGFRKIDP DRWEFANEGF LRGQKHLLKN IKRRRATYHH HQTPQSQASS GACVEVGQFG 180 VDAEMDRLKR DKQVLMMELV KLRQEQQNTR AYLQAMEQRL RGTEIKQRQM MNFLARAMQN 240 PSFIQQLLQQ KEKRKVLEEA ITRKRRRPIQ QGGKQSGGGS GRFLGEGSST IKIEPLESEE 300 YGFGITELEA LALEMQGLGR ARHEEEEEEE EEEEEEEEED HLPPPADGDK VLDEGFWEEL 360 FSERLEVASG DDEDVKVLAD RLGYLGSDPR

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MNLLFEHWGG ICMVDLYAIV AEMNPLFPVK EEFPGSNSSE TDRERLAMAP PIPMEGLHDA  60
GPPPFLTKTF EIVDDFNTDH VISWSFGGNS FVVWDPHCFS TELLPRFFKH NNFSSFVRQL  120
NTYGFRKIDP DRWEFANEGF LRGQKHLLKN IKRRRATYHH HQTPQSQASS GACVEVGQFG  180
VDAEMDRLKR DKQVLMMELV KLRQEQQNTR AYLQAMEQRL RGTEIKQRQM MNFLARAMQN  240
PSFIQQLLQQ KEKRKVLEEA ITRKRRRPIQ QGGKQSGGGS GRFLGEGSST IKIEPLESEE  300
YGFGITELEA LALEMQGLGR ARHEEEEEEE EEEEEEEEED HLPPPADGDK VLDEGFWEEL  360
FSERLEVASG DDEDVKVLAD RLGYLGSDPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	154	LKNIKRR
2	253	267	KRKVLEEAITRKRRR
3	263	267	RKRRR
4	272	279	GGKQSGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-123	HSF family protein