PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991639.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 372aa MW: 42888 Da PI: 4.7649

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991639.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.8	2e-34	47	138	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++ei++d +++++isws gnsfvv+d++ f++++Lp++Fkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+k+ll++ XP_022991639.1 47 FLTKTFEIVDDFNTDHVISWSFGGNSFVVWDPHCFSTELLPRFFKHNNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFLRGQKHLLKN 132 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr++ XP_022991639.1 133 IKRRRA 138 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MLQEMNPLFP VKEEFPGSNS SETDRERLAM APPIPMEGLH DAGPPPFLTK TFEIVDDFNT 60 DHVISWSFGG NSFVVWDPHC FSTELLPRFF KHNNFSSFVR QLNTYGFRKI DPDRWEFANE 120 GFLRGQKHLL KNIKRRRATY HHHQTPQSQA SSGACVEVGQ FGVDAEMDRL KRDKQVLMME 180 LVKLRQEQQN TRAYLQAMEQ RLRGTEIKQR QMMNFLARAM QNPSFIQQLL QQKEKRKVLE 240 EAITRKRRRP IQQGGKQSGG GSGRFLGEGS STIKIEPLES EEYGFGITEL EALALEMQGL 300 GRARHEEEEE EEEEEEEEEE EDHLPPPADG DKVLDEGFWE ELFSERLEVA SGDDEDVKVL 360 ADRLGYLGSD PR

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MLQEMNPLFP VKEEFPGSNS SETDRERLAM APPIPMEGLH DAGPPPFLTK TFEIVDDFNT  60
DHVISWSFGG NSFVVWDPHC FSTELLPRFF KHNNFSSFVR QLNTYGFRKI DPDRWEFANE  120
GFLRGQKHLL KNIKRRRATY HHHQTPQSQA SSGACVEVGQ FGVDAEMDRL KRDKQVLMME  180
LVKLRQEQQN TRAYLQAMEQ RLRGTEIKQR QMMNFLARAM QNPSFIQQLL QQKEKRKVLE  240
EAITRKRRRP IQQGGKQSGG GSGRFLGEGS STIKIEPLES EEYGFGITEL EALALEMQGL  300
GRARHEEEEE EEEEEEEEEE EDHLPPPADG DKVLDEGFWE ELFSERLEVA SGDDEDVKVL  360
ADRLGYLGSD PR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	136	LKNIKRR
2	235	249	KRKVLEEAITRKRRR
3	245	249	RKRRR
4	254	261	GGKQSGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-123	HSF family protein