PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022991902.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 377aa    MW: 42154.9 Da    PI: 8.0742
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022991902.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.6e-12314359655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el P      +k  s a++Le+A+eYIk Lq
  XP_022991902.1 314 SIAERMRRIRISERMKKLQELFPDM----DKQTSTADMLELAIEYIKGLQ 359
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MSLLCSPNFI FSNDEVKKYP DFMDCDSTNN HVSQQENPNS APHSLIASLV NGTEGFDSSN  60
NGGGGREDYR FIRSSSPEVE AFLSRFMASY NEETFDSGSD ERAVKQEMGE SVRQHNEFCN  120
QSSSMVNSAG GAQIGNLFRV MHSSDYAARN SANLFRQSSS PAGFFSNLAP QNAGNAARDI  180
QKFGSCSRKD VDVAYPYSRI GSQMNISGQS FASTHMPPIA EEENKRIRAV RSSWDSSTIR  240
DLKRGRDNNG RTFPTSILLE TQNADSGNDI RGLAHHLSLP ITFNKDPVEK FLRFEEPVRH  300
QIRAKRGCAT HPRSIAERMR RIRISERMKK LQELFPDMDK QTSTADMLEL AIEYIKGLQR  360
QVKTLTDTKA KCTCSGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-40bHLH family protein