PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022991915.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 293aa    MW: 32824.6 Da    PI: 8.0779
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022991915.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.15.9e-33125181158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +ksrkpylheSRh hA+rR+RgsgGrF
  XP_022991915.1 125 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-IKSRKPYLHESRHLHAMRRARGSGGRF 181
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MPSKPENVDQ QTVDGSKYLV QSTKYSEAWW HGVGNNTIAG ENATKTASTD YLNDTVSSGG  60
TQSQANDENI GKEVQHLKYI PFSTSPPVGE RLDLNSQMEL VGHSIFPHIY GLHHARMPLP  120
LEMEEEPVYV NAKQYHGILR RRQSRAKAEL EKKVIKSRKP YLHESRHLHA MRRARGSGGR  180
FLNTKKPNNV ISNTDREKGI NFGANHPTKP VNEAGSKYMV ADENGIKDTL NEEDKEFMTQ  240
NLQITRAFFN GKLNGHGIST YTSQLADVEG DHLDQPHESM QVNGAPQRAI PIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.14e-30NF-YA family protein