PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992026.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C3H

Protein Properties

Length: 233aa MW: 26603.2 Da PI: 9.008

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	25.7	2e-08	94	115	4	25
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 + Cr f+r C yGd+C++ H XP_022992026.1 94 KACRQFQRRRKCAYGDQCRYLH 115 67******************** PP
2	zf-CCCH	25.1	3.1e-08	175	198	2	25
-S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaH 25 kt+lC ++tG C+yG+ C+ aH XP_022992026.1 175 KTRLCYPLQKTGSCPYGAVCRIAH 198 8*******************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MSATYRFNEI TPPVPEARGD SSALPPPHSD SGLQQRTMPS KSRIPPSNNR NIGYDHELGC 60 MSTPALNDTH RRLPSLRGIE FHEGQLSGRS NEMKACRQFQ RRRKCAYGDQ CRYLHEIPEK 120 TRDFGSTTQN YEVRIVDSGH VMNRRRGLDQ LEEVRSKVQT EIVVRGEIPK PVRCKTRLCY 180 PLQKTGSCPY GAVCRIAHEE AGIDIVLVFF VFGENRTTKA WALHCCITTW ERI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19360.1	9e-12	C3H family protein