PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992028.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C3H

Protein Properties

Length: 221aa MW: 25295.7 Da PI: 9.1763

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992028.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	25.8	1.9e-08	94	115	4	25
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 + Cr f+r C yGd+C++ H XP_022992028.1 94 KACRQFQRRRKCAYGDQCRYLH 115 67******************** PP
2	zf-CCCH	25.2	2.9e-08	175	198	2	25
-S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaH 25 kt+lC ++tG C+yG+ C+ aH XP_022992028.1 175 KTRLCYPLQKTGSCPYGAVCRIAH 198 8*******************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MSATYRFNEI TPPVPEARGD SSALPPPHSD SGLQQRTMPS KSRIPPSNNR NIGYDHELGC 60 MSTPALNDTH RRLPSLRGIE FHEGQLSGRS NEMKACRQFQ RRRKCAYGDQ CRYLHEIPEK 120 TRDFGSTTQN YEVRIVDSGH VMNRRRGLDQ LEEVRSKVQT EIVVRGEIPK PVRCKTRLCY 180 PLQKTGSCPY GAVCRIAHEE AENRTTKAWA LHCCITTWER I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19360.1	1e-12	C3H family protein