PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022992334.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 328aa    MW: 36224.2 Da    PI: 6.9356
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022992334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.24.1e-17223257135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C++ kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022992334.1 223 CLHCQSEKTPQWRTGPMGPKTLCNACGVRYKSGRL 257
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEVNKFMIGG YFDAGVGQFS QEKTKATEHF AIDDLFDFSN EDAIMMDGFF DNVAGTSTES  60
STVTVVDSCN SSVSGGDHHH FHGNIGSRSF DESQFSGDLC VPCDDLAELE WLSNFVEDSF  120
STEGKDLQAL NYLTNSHSIS KPQTPETSSS SELPPSDSSK NTQRFPAETP LPSKARSKRS  180
RTAPCDWTTR LLHLLSPTDR KPPKSSSSKK KDAPNGDSSS RKCLHCQSEK TPQWRTGPMG  240
PKTLCNACGV RYKSGRLVPE YRPAASPTFI SAKHSNSHRK VLELRRQKEL QMAQQQQQQF  300
KNQGSIFGIT NGCDEYLISH HMGPVIGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-63GATA family protein