PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022992335.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 324aa    MW: 37265.6 Da    PI: 6.4583
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022992335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B398.34.8e-3180184199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr. 87 
                     f+kv tpsdv+k++rlv+pk++ae++       ++  ++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+ 
  XP_022992335.1  80 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldsaTYD--KGLILNFEDPNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDVVSFHRGvGDs 172
                     89*************************99865444..6779************************************************665887 PP

                     SEE..EEEEE-S CS
              B3  88 sefelvvkvfrk 99 
                      + +l++ ++r+
  XP_022992335.1 173 ARDRLFIDWRRR 184
                     888999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MEFLTKSNAY SEEEEEEEEE EEDDEIRGVA CDFFPNSRTQ NQEWVQHPPI NQPQDHHPLM  60
DLSLRMETNG FGVVEREHMF DKVVTPSDVG KLNRLVIPKQ HAEKYFPLDS ATYDKGLILN  120
FEDPNGKPWR FRYSYWNSSQ SYVMTKGWSR FVKEKKLDAG DVVSFHRGVG DSARDRLFID  180
WRRRPNALTP PPHHHFSNPP LLFLPQSLRW ATARHLPPPA HPPPHHRLYS NYAFEIPNLG  240
IPHNNNSSMY YFRPTSMSSS SEIVVHSEGS SMGIKKPTSG AAKRLRLFGV NMECATEDGG  300
EEDLSNGSVS RRGKQPFSLN WDLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.12e-68B3 family protein