PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992438.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 468aa MW: 50685.7 Da PI: 7.0734

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992438.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.7	4.9e-09	291	339	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + sk Ka +L + ++Y++sLq XP_022992438.1 291 NSHSLAERVRREKISERMKFLQELVPGC----SKVTGKAVMLDEIINYVQSLQ 339 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MDNSISCTHS MFSDMRFGET TLTSMPVAVG EPFSSTVWEQ AANSQNMGTS KASGCPVSLS 60 TDISWNLSHN MFKGGIYLPH GMLPQSLSQL PADSSFIERA ARLSCFSGGN FGDIVGHFNI 120 HEPPMSVSIP ERWDEIPRNG LGLVSGIEGQ SQRTNEHGAA ENGSPLKVDD RGKQATDGSS 180 ANESDEAEFS GGDGPCALEV TANQVSAKGR KRKRSGQVMN NDSCSDQPNG PLQQATVSAK 240 NDTQNQPKRD QNPSSNANKA AGKHGKQASQ PSDPPKEEYI HVRARRGQAT NSHSLAERVR 300 REKISERMKF LQELVPGCSK VTGKAVMLDE IINYVQSLQQ QVEFLSMKLA TVNPRMDINI 360 DRLVAKDILQ SQAGPSLTYM PTGCPPPCVS HHRLIPSGFS AIGSSEMLRK MSSQMNPRSN 420 GFKEPSQIKS VWDGELQNIV QMSFGMSTTL NCLELEGSDS PGNTKVAR

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MDNSISCTHS MFSDMRFGET TLTSMPVAVG EPFSSTVWEQ AANSQNMGTS KASGCPVSLS  60
TDISWNLSHN MFKGGIYLPH GMLPQSLSQL PADSSFIERA ARLSCFSGGN FGDIVGHFNI  120
HEPPMSVSIP ERWDEIPRNG LGLVSGIEGQ SQRTNEHGAA ENGSPLKVDD RGKQATDGSS  180
ANESDEAEFS GGDGPCALEV TANQVSAKGR KRKRSGQVMN NDSCSDQPNG PLQQATVSAK  240
NDTQNQPKRD QNPSSNANKA AGKHGKQASQ PSDPPKEEYI HVRARRGQAT NSHSLAERVR  300
REKISERMKF LQELVPGCSK VTGKAVMLDE IINYVQSLQQ QVEFLSMKLA TVNPRMDINI  360
DRLVAKDILQ SQAGPSLTYM PTGCPPPCVS HHRLIPSGFS AIGSSEMLRK MSSQMNPRSN  420
GFKEPSQIKS VWDGELQNIV QMSFGMSTTL NCLELEGSDS PGNTKVAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.1	1e-92	bHLH family protein