PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022992480.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 260aa    MW: 29221.4 Da    PI: 6.1628
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022992480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.35.7e-22118179259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTE.EEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkv.veitYegeHnhe 59 
                     +Dg +WrKYGqK ++++++p+sYYrCt++   +Cp+ k+v+r +++ k+  eitY ++H++ 
  XP_022992480.1 118 EDGRAWRKYGQKAIQNKTYPKSYYRCTHKydqSCPAVKHVQRIEDNSKImYEITYISDHTCA 179
                     79**************************99999**********988886269*******996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MEATGYRHRR LTAETWRRIM EILLRGRQSA AQLQIDLQSA ASATGINWLA LADEIESSFA  60
EAISLVVSSE SASCPDHSLC SDLDSGYSRR SPAVKDLGRG NKRRKLAKTR TVTAATAEDG  120
RAWRKYGQKA IQNKTYPKSY YRCTHKYDQS CPAVKHVQRI EDNSKIMYEI TYISDHTCAP  180
ASPIADTSSD SYNLICFSNS HNGQFTEGTD DNATKVGETT MASCVMNEID LWAEFNDFEH  240
QYGLFGDNED PYFFVDSFLK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102129KRRKLAKTRTVTAATAEDGRAWRKYGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-27WRKY family protein