PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992705.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 259aa MW: 29552.1 Da PI: 6.9789

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.8	1e-07	43	86	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 WT Ed+l+ +a + + +W ++a +++ g+++ ++k+++ XP_022992705.1 43 QWTRLEDKLFEEALVVVPENlpdRWQRVADHVP-GKSPWEVKDHY 86 6***************99*********.********9 PP
2	Myb_DNA-binding	44.2	4.5e-14	142	186	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + k++G+g+W++I+r + +Rt+ q+ s+ qky XP_022992705.1 142 PWTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKY 186 8***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MRNLQETDSF QSRNPINPFL VFLFMVVMSH DSRWTNMTQS STQWTRLEDK LFEEALVVVP 60 ENLPDRWQRV ADHVPGKSPW EVKDHYEALV HDVLEIDSGR VELPSYADET AGGLPEWDSS 120 GQISFGTRAK AGGDNERKKG TPWTEEEHRL FLLGLKKFGK GDWRSISRNV VITRTPTQVA 180 SHAQKYFLRQ NSGKKERKRS SIHDITTVDN NSIPMPIDPN WISPAPNPTV QSSMQQVSPT 240 GHLQDQGGSF GFQNYRFPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	2e-71	MYB family protein